BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003G11SP1|AL425185
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig748 1543 0.0
3x_Contig1281 177 5e-44
>3x_Contig748
Length = 2621
Score = 1543 bits (778), Expect = 0.0
Identities = 796/800 (99%), Gaps = 2/800 (0%)
Strand = Plus / Minus
Query: 165 gattttcaaattccagcaaacttaatttgatttcatcgcttagaagatcagctttctttc 224
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2621 gattttgaaattccagcaaacttaatttgatttcatcgcttagaagatcagctttctttc 2562
Query: 225 tagcttcaggtaaaaccggtactaccttatttaaaacacgatctaacggatggaatttag 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2561 tagcttcaggtaaaaccggtactaccttatttaaaacacgatctaacggatggaatttag 2502
Query: 285 aagggtcacttaggtttccaatttcaatagaacgctcaacgttaattactgactgtgaaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2501 aagggtcacttaggtttccaatttcaatagaacgctcaacgttaattactgactgtgaaa 2442
Query: 345 attccttacaatcagttaccaactgttcgatggatatttttgttacgctaaaaataggct 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2441 attccttacaatcagttaccaactgttcgatggatatttttgttacgctaaaaataggct 2382
Query: 405 caagctcttccacgaaatggctgtattcgggataattttcacgaattatcttttccacat 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2381 caagctcttccacgaaatggctgtattcgggataattttcacgaattatcttttccacat 2322
Query: 465 agttcaaaaaagtcatactgttcttttcatctttaatgaaggtcaatctttgtagggtgc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2321 agttcaaaaaagtcatactgttcttttcatctttaatgaaggtcaatctttgtagggtgc 2262
Query: 525 ttagcttgaacccctgagcttgctttgaagaatcattcatataattaccaactgccaaaa 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2261 ttagcttgaacccctgagcttgctttgaagaatcattcatataattaccaactgccaaaa 2202
Query: 585 taacatcgaaaacatgtctgagactttcagattgttcgatgcactgaactgctctatcaa 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 taacatcgaaaacatgtctgagactttcagattgttcgatgcactgaactgctctatcaa 2142
Query: 645 tttttcttagtttagtgaccaaatccgaatagtctttttcataagtagttatcatagtga 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 tttttcttagtttagtgaccaaatccgaatagtctttttcataagtagttatcatagtga 2082
Query: 705 ttgctctcatacgagacccccagtacggttgtaagttaatcataaattcaacatatagtt 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 ttgctctcatacgagacccccagtacggttgtaagttaatcataaattcaacatatagtt 2022
Query: 765 gatctgcacgttgaagttcattaggatctttttcggggggttttgcatcgtcaacagatg 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 gatctgcacgttgaagttcattaggatctttttcggggggttttgcatcgtcaacagatg 1962
Query: 825 tcactccctcccaatcagtactgtaaggattgaaatatcgtgccaaattattcgttactt 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 tcactccctcccaatcagtactgtaaggattgaaatatcgtgccaaattattcgttactt 1902
Query: 885 caattatggtaggctttgacaaaaactctattacgctaggagtagatagg-awtctctat 943
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 1901 caattatggtaggctttgacaaaaactctattacgctaggagtagataggaattctctat 1842
Query: 944 cacatttca-taccttccca 962
||||||||| ||||||||||
Sbjct: 1841 cacatttcattaccttccca 1822
>3x_Contig1281
Length = 7825
Score = 177 bits (89), Expect = 5e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 atcttcaatcattttctttctcctttcgtaagcacgttcttcttcttccagtttgacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7737 atcttcaatcattttctttctcctttcgtaagcacgttcttcttcttccagtttgacatt 7796
Query: 61 atgagttttagctttcttgaattcggtaa 89
|||||||||||||||||||||||||||||
Sbjct: 7797 atgagttttagctttcttgaattcggtaa 7825
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8889
Number of Sequences: 1807
Number of extensions: 8889
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)